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Class: LifestyleBehavioral

BDC Variable Library category: Lifestyle/Behavioral

URI: bdcvl:LifestyleBehavioral

 classDiagram
    class LifestyleBehavioral
    click LifestyleBehavioral href "../LifestyleBehavioral/"
      LifestyleBehavioral : alcohol

      LifestyleBehavioral : alcohol_servings

      LifestyleBehavioral : cig_smok





        LifestyleBehavioral --> "0..1" CigSmokEnum : cig_smok
        click CigSmokEnum href "../CigSmokEnum/"



      LifestyleBehavioral : fruit_serving

      LifestyleBehavioral : sleep_duration_daily

      LifestyleBehavioral : sodium_intak

      LifestyleBehavioral : vege_serving

Slots

Name Cardinality and Range Description Inheritance
alcohol 0..1
String		 MeasurementObservation derivation of 'alcohol' direct
alcohol_servings 0..1
String		 MeasurementObservation derivation of 'alcohol_servings' direct
cig_smok 0..1
CigSmokEnum		 Observation derivation of 'cig_smok' direct
fruit_serving 0..1
String		 MeasurementObservation derivation of 'fruit_serving' direct
sleep_duration_daily 0..1
String		 MeasurementObservation derivation of 'sleep_duration_daily' direct
sodium_intak 0..1
String		 MeasurementObservation derivation of 'sodium_intak' direct
vege_serving 0..1
String		 MeasurementObservation derivation of 'vege_serving' direct

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self bdcvl:LifestyleBehavioral
native bdcvl:LifestyleBehavioral

LinkML Source

Direct

name: LifestyleBehavioral
description: 'BDC Variable Library category: Lifestyle/Behavioral'
from_schema: https://w3id.org/bdc/varlib
slots:
- alcohol
- alcohol_servings
- cig_smok
- fruit_serving
- sleep_duration_daily
- sodium_intak
- vege_serving

Induced

name: LifestyleBehavioral
description: 'BDC Variable Library category: Lifestyle/Behavioral'
from_schema: https://w3id.org/bdc/varlib
attributes:
  alcohol:
    name: alcohol
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: COPDGene
      dataset_accession:
        tag: dataset_accession
        value: pht002239
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: COPDGene-ingest/alcohol.yaml
    description: MeasurementObservation derivation of 'alcohol'
    title: alcohol
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:35609491
    rank: 1000
    owner: LifestyleBehavioral
    domain_of:
    - LifestyleBehavioral
    range: string
  alcohol_servings:
    name: alcohol_servings
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: CARDIA, CHS, JHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht001568, pht001655, pht001760, pht001600, pht001714, pht001565, pht001712,
          pht001451, pht001452, pht001474, pht001475, pht001489, pht001490, pht001491,
          pht001492, pht001493, pht001495, pht003699, pht003700, pht008731, pht008729,
          pht001111, pht001116, pht001118, pht001119, pht001120, pht001121, pht003086,
          pht003091, pht001003, pht002125
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: CARDIA-ingest/alcohol_servings.yaml, CHS-ingest/alcohol_servings.yaml,
          JHS-ingest/alcohol_servings.yaml, MESA-ingest/alcohol_servings.yaml, WHI-ingest/alcohol_servings.yaml
    description: MeasurementObservation derivation of 'alcohol_servings'
    title: alcohol_servings
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:35609491
    rank: 1000
    owner: LifestyleBehavioral
    domain_of:
    - LifestyleBehavioral
    range: string
  cig_smok:
    name: cig_smok
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: Observation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, LTRC, MESA, SPIROMICS,
          WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004047, pht004053, pht004054, pht004063, pht004064, pht004102, pht004103,
          pht004111, pht004145, pht004146, pht012504, pht012813, pht012814, pht012815,
          pht001572, pht001573, pht001450, pht001474, pht001475, pht001488, pht001489,
          pht001490, pht001491, pht001492, pht001493, pht001494, pht001495, pht003699,
          pht003700, pht002239, pht000009, pht007777, pht012916, pht004715, pht001977,
          pht008729, pht010063, pht001111, pht001112, pht001114, pht001116, pht001118,
          pht001119, pht001120, pht001121, pht001122, pht003086, pht003087, pht003091,
          pht013308, pht001003
      variable_accession:
        tag: variable_accession
        value: phv00203798, phv00203911, phv00204312, phv00204713, phv00204859, phv00206780,
          phv00507404, phv00511992, phv00512115, phv00512398, phv00113168, phv00113224,
          phv00099445, phv00101622, phv00102802, phv00104378, phv00105010, phv00105886,
          phv00107229, phv00108097, phv00108732, phv00109464, phv00110131, phv00198810,
          phv00568806, phv00000543, phv00000780, phv00369809, phv00369810, phv00369811,
          phv00369812, phv00369813, phv00369814, phv00369815, phv00369816, phv00369817,
          phv00369818, phv00369819, phv00369820, phv00369821, phv00369822, phv00369823,
          phv00369824, phv00369825, phv00369826, phv00369827, phv00369828, phv00369829,
          phv00369830, phv00369831, phv00369832, phv00369833, phv00369834, phv00369835,
          phv00369836, phv00369837, phv00369838, phv00525298, phv00525299, phv00525300,
          phv00525301, phv00525302, phv00525303, phv00525304, phv00525305, phv00525306,
          phv00566385, phv00429454, phv00083241, phv00083613, phv00083708, phv00083843,
          phv00085545, phv00086096, phv00086102, phv00086580, phv00086586, phv00087012,
          phv00087017, phv00087082, phv00087699, phv00087839, phv00175428, phv00175450,
          phv00175860, phv00175945, phv00176862, phv00176884, phv00528736, phv00078825
      source_file:
        tag: source_file
        value: ARIC-ingest/cig_smok.yaml, CARDIA-ingest/cig_smok.yaml, CHS-ingest/cig_smok.yaml,
          COPDGene-ingest/cig_smok.yaml, FHS-ingest/cig_smok.yaml, HCHS-ingest/cig_smok.yaml,
          JHS-ingest/cig_smok.yaml, LTRC-ingest/cig_smok.yaml, MESA-ingest/cig_smok.yaml,
          SPIROMICS-ingest/cig_smok.yaml, WHI-ingest/cig_smok.yaml
    description: Observation derivation of 'cig_smok'
    title: cig_smok
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:4282779
    - OMOP:35811013
    rank: 1000
    owner: LifestyleBehavioral
    domain_of:
    - LifestyleBehavioral
    range: CigSmokEnum
  fruit_serving:
    name: fruit_serving
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, FHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004068, pht004070, pht004069, pht001565, pht001712, pht001713, pht001566,
          pht001451, pht001490, pht000680, pht000681, pht000682, pht002150, pht002151,
          pht002153, pht002350, pht002900, pht004317, pht001517, pht002125, pht006218
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/fruit_serving.yaml, CARDIA-ingest/fruit_serving.yaml, CHS-ingest/fruit_serving.yaml,
          FHS-ingest/fruit_serving.yaml, MESA-ingest/fruit_serving.yaml, WHI-ingest/fruit_serving.yaml
    description: MeasurementObservation derivation of 'fruit_serving'
    title: fruit_serving
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:21493059
    rank: 1000
    owner: LifestyleBehavioral
    domain_of:
    - LifestyleBehavioral
    range: string
  sleep_duration_daily:
    name: sleep_duration_daily
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, FHS, HCHS, JHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht006479, pht001687, pht001839, pht001460, pht003699, pht003700, pht000098,
          pht003094, pht006005, pht004814, pht004815, pht005140, pht000014, pht000022,
          pht000031, pht000033, pht000036, pht000747, pht000074, pht000395, pht004715,
          pht001963, pht008764, pht001120, pht000990, pht006214, pht000993, pht001010,
          pht001006, pht001005
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/sleep_duration_daily.yaml, CARDIA-ingest/sleep_duration_daily.yaml,
          CHS-ingest/sleep_duration_daily.yaml, FHS-ingest/sleep_duration_daily.yaml,
          HCHS-ingest/sleep_duration_daily.yaml, JHS-ingest/sleep_duration_daily.yaml,
          MESA-ingest/sleep_duration_daily.yaml, WHI-ingest/sleep_duration_daily.yaml
    description: MeasurementObservation derivation of 'sleep_duration_daily'
    title: sleep_duration_daily
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:2040171
    rank: 1000
    owner: LifestyleBehavioral
    domain_of:
    - LifestyleBehavioral
    range: string
  sodium_intak:
    name: sodium_intak
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, FHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004139, pht004036, pht004137, pht001638, pht001592, pht001591, pht001746,
          pht001745, pht001451, pht001494, pht002151, pht002152, pht002153, pht000680,
          pht000681, pht000682, pht002150, pht002900, pht002350, pht004317, pht002125
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/sodium_intak.yaml, CARDIA-ingest/sodium_intak.yaml, CHS-ingest/sodium_intak.yaml,
          FHS-ingest/sodium_intak.yaml, MESA-ingest/sodium_intak.yaml, WHI-ingest/sodium_intak.yaml
    description: MeasurementObservation derivation of 'sodium_intak'
    title: sodium_intak
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:606729
    rank: 1000
    owner: LifestyleBehavioral
    domain_of:
    - LifestyleBehavioral
    range: string
  vege_serving:
    name: vege_serving
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, FHS, JHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004070, pht004068, pht004069, pht001565, pht001712, pht001490, pht002151,
          pht002153, pht000680, pht000681, pht000682, pht002150, pht002900, pht002350,
          pht008729, pht004317, pht001517, pht006218
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/vege_serving.yaml, CARDIA-ingest/vege_serving.yaml, CHS-ingest/vege_serving.yaml,
          FHS-ingest/vege_serving.yaml, JHS-ingest/vege_serving.yaml, MESA-ingest/vege_serving.yaml,
          WHI-ingest/vege_serving.yaml
    description: MeasurementObservation derivation of 'vege_serving'
    title: vege_serving
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:4042886
    - OMOP:37311566
    rank: 1000
    owner: LifestyleBehavioral
    domain_of:
    - LifestyleBehavioral
    range: string