Class: StudyAdministrativeMetadata

BDC Variable Library category: Study Administrative/Metadata

 classDiagram
    class StudyAdministrativeMetadata
    click StudyAdministrativeMetadata href "../StudyAdministrativeMetadata/"
      StudyAdministrativeMetadata : participant

      StudyAdministrativeMetadata : person

      StudyAdministrativeMetadata : research_study

      StudyAdministrativeMetadata : researchstudy

      StudyAdministrativeMetadata : visit

Slots

Name	Cardinality and Range	Description	Inheritance
participant	0..1 String	Participant derivation of 'participant'	direct
person	0..1 String	Person derivation of 'person'	direct
research_study	0..1 String	ResearchStudy derivation of 'research_study'	direct
researchstudy	0..1 String	ResearchStudy derivation of 'researchstudy'	direct
visit	0..1 String	Visit derivation of 'visit'	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/bdc/varlib

Mappings

Mapping Type	Mapped Value
self	bdcvl:StudyAdministrativeMetadata
native	bdcvl:StudyAdministrativeMetadata

LinkML Source

Direct

name: StudyAdministrativeMetadata
description: 'BDC Variable Library category: Study Administrative/Metadata'
from_schema: https://w3id.org/bdc/varlib
slots:
- participant
- person
- research_study
- researchstudy
- visit

Induced

name: StudyAdministrativeMetadata
description: 'BDC Variable Library category: Study Administrative/Metadata'
from_schema: https://w3id.org/bdc/varlib
attributes:
  participant:
    name: participant
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: Participant
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, LTRC, MESA, SPIROMICS,
          WHI
      dataset_accession:
        tag: dataset_accession
        value: pht001440, pht001559, pht003298, pht001999, pht001447, pht016246, pht003099,
          pht004715, pht008729, pht010057, pht001116, pht013308, pht000998
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/participant.yaml, CARDIA-ingest/participant.yaml, CHS-ingest/participant.yaml,
          COPDGene-ingest/participant.yaml, FHS-ingest/participant.yaml, HCHS-ingest/participant.yaml,
          JHS-ingest/participant.yaml, LTRC-ingest/participant.yaml, MESA-ingest/participant.yaml,
          SPIROMICS-ingest/participant.yaml, WHI-ingest/participant.yaml
    description: Participant derivation of 'participant'
    title: participant
    from_schema: https://w3id.org/bdc/varlib
    rank: 1000
    owner: StudyAdministrativeMetadata
    domain_of:
    - StudyAdministrativeMetadata
    range: string
  person:
    name: person
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: Person
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, LTRC, MESA, SPIROMICS,
          WHI
      dataset_accession:
        tag: dataset_accession
        value: pht001440, pht001559, pht001447, pht016246, pht003099, pht004715, pht008729,
          pht010057, pht001116, pht013308, pht000998
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/person.yaml, CARDIA-ingest/person.yaml, CHS-ingest/person.yaml,
          COPDGene-ingest/person.yaml, FHS-ingest/person.yaml, HCHS-ingest/person.yaml,
          JHS-ingest/person.yaml, LTRC-ingest/person.yaml, MESA-ingest/person.yaml,
          SPIROMICS-ingest/person.yaml, WHI-ingest/person.yaml
    description: Person derivation of 'person'
    title: person
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:434489
    - OMOP:4230556
    rank: 1000
    owner: StudyAdministrativeMetadata
    domain_of:
    - StudyAdministrativeMetadata
    range: string
  research_study:
    name: research_study
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: ResearchStudy
      source_study:
        tag: source_study
        value: HCHS, JHS, LTRC, MESA, SPIROMICS, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004715, pht008729, pht010057, pht001116, pht013308, pht000998
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: HCHS-ingest/research_study.yaml, JHS-ingest/research_study.yaml, LTRC-ingest/research_study.yaml,
          MESA-ingest/research_study.yaml, SPIROMICS-ingest/research_study.yaml, WHI-ingest/research_study.yaml
    description: ResearchStudy derivation of 'research_study'
    title: research_study
    from_schema: https://w3id.org/bdc/varlib
    rank: 1000
    owner: StudyAdministrativeMetadata
    domain_of:
    - StudyAdministrativeMetadata
    range: string
  researchstudy:
    name: researchstudy
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: ResearchStudy
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS
      dataset_accession:
        tag: dataset_accession
        value: pht001440, pht001559, pht001447, pht016246, pht003099
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/researchstudy.yaml, CARDIA-ingest/researchstudy.yaml, CHS-ingest/researchstudy.yaml,
          COPDGene-ingest/researchstudy.yaml, FHS-ingest/researchstudy.yaml
    description: ResearchStudy derivation of 'researchstudy'
    title: researchstudy
    from_schema: https://w3id.org/bdc/varlib
    rank: 1000
    owner: StudyAdministrativeMetadata
    domain_of:
    - StudyAdministrativeMetadata
    range: string
  visit:
    name: visit
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: Visit
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, LTRC, MESA, SPIROMICS,
          WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004063, pht004064, pht006414, pht006415, pht006416, pht006467, pht006443,
          pht012504, pht004079, pht006468, pht012812, pht012813, pht012814, pht012815,
          pht012821, pht012822, pht012823, pht012824, pht012835, pht012853, pht004053,
          pht004061, pht004102, pht004047, pht004049, pht004054, pht012503, pht006480,
          pht012505, pht012826, pht012850, pht009479, pht004044, pht004045, pht001559,
          pht001626, pht001667, pht001706, pht001781, pht001851, pht001857, pht001854,
          pht001855, pht003298, pht001999, pht001869, pht001871, pht001870, pht001449,
          pht001450, pht001451, pht001452, pht001488, pht001489, pht001491, pht001492,
          pht001493, pht001494, pht001495, pht001474, pht001475, pht001460, pht003700,
          pht003699, pht001473, pht001476, pht001478, pht001480, pht001482, pht001484,
          pht001486, pht001477, pht001479, pht001481, pht001483, pht001485, pht001487,
          pht001464, pht001466, pht001459, pht001468, pht001457, pht005981, pht001456,
          pht001490, pht002239, pht003099, pht000395, pht000396, pht000397, pht006018,
          pht000160, pht000172, pht004715, pht008729, pht008782, pht008730, pht008731,
          pht008725, pht008791, pht001969, pht008728, pht001960, pht008755, pht008756,
          pht010057, pht001111, pht001112, pht001114, pht001116, pht001118, pht001119,
          pht001120, pht001121, pht001122, pht003086, pht003087, pht003091, pht001123,
          pht001217, pht003659, pht001204, pht001205, pht001984, pht002099, pht004326,
          pht002140, pht002198, pht003089, pht002515, pht004319, pht004317, pht003088,
          pht013308, pht000998, pht001014, pht000990, pht000991, pht000992, pht000993,
          pht000994, pht000995, pht000996, pht003395, pht001019, pht002118, pht000987,
          pht006215, pht006217, pht003402, pht003405, pht006212, pht003410, pht003406,
          pht003413, pht003414, pht006213, pht006214, pht002754, pht001514, pht003407,
          pht003415, pht003416, pht006223
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/visit.yaml, CARDIA-ingest/visit.yaml, CHS-ingest/visit.yaml,
          COPDGene-ingest/visit.yaml, FHS-ingest/visit.yaml, HCHS-ingest/visit.yaml,
          JHS-ingest/visit.yaml, LTRC-ingest/visit.yaml, MESA-ingest/visit.yaml, SPIROMICS-ingest/visit.yaml,
          WHI-ingest/visit.yaml
    description: Visit derivation of 'visit'
    title: visit
    from_schema: https://w3id.org/bdc/varlib
    rank: 1000
    owner: StudyAdministrativeMetadata
    domain_of:
    - StudyAdministrativeMetadata
    range: string