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Class: VitalSignsAnthropometry

BDC Variable Library category: Vital Signs/Anthropometry

URI: bdcvl:VitalSignsAnthropometry

 classDiagram
    class VitalSignsAnthropometry
    click VitalSignsAnthropometry href "../VitalSignsAnthropometry/"
      VitalSignsAnthropometry : bdy_hgt

      VitalSignsAnthropometry : bdy_temp

      VitalSignsAnthropometry : bdy_wgt

      VitalSignsAnthropometry : blood_pressure

      VitalSignsAnthropometry : bmi

      VitalSignsAnthropometry : body_measures

      VitalSignsAnthropometry : hip_circ

      VitalSignsAnthropometry : hrt_rt

      VitalSignsAnthropometry : hrtrt

      VitalSignsAnthropometry : mean_art_press

      VitalSignsAnthropometry : mn_art_pres

      VitalSignsAnthropometry : spo2

      VitalSignsAnthropometry : waist_circ

      VitalSignsAnthropometry : waist_hip

Slots

Name Cardinality and Range Description Inheritance
bdy_hgt 0..1
String		 MeasurementObservation derivation of 'bdy_hgt' direct
bdy_temp 0..1
String		 MeasurementObservation derivation of 'bdy_temp' direct
bdy_wgt 0..1
String		 MeasurementObservation derivation of 'bdy_wgt' direct
blood_pressure 0..1
String		 MeasurementObservationSet/MeasurementObservation derivation of 'blood_pressur... direct
bmi 0..1
String		 MeasurementObservation derivation of 'bmi' direct
body_measures 0..1
String		 MeasurementObservation derivation of 'body_measures' direct
hip_circ 0..1
String		 MeasurementObservation derivation of 'hip_circ' direct
hrt_rt 0..1
String		 MeasurementObservation derivation of 'hrt_rt' direct
hrtrt 0..1
String		 MeasurementObservation derivation of 'hrtrt' direct
mean_art_press 0..1
String		 MeasurementObservation derivation of 'mean_art_press' direct
mn_art_pres 0..1
String		 MeasurementObservation derivation of 'mn_art_pres' direct
spo2 0..1
String		 MeasurementObservation derivation of 'spo2' direct
waist_circ 0..1
String		 MeasurementObservation derivation of 'waist_circ' direct
waist_hip 0..1
String		 MeasurementObservation derivation of 'waist_hip' direct

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self bdcvl:VitalSignsAnthropometry
native bdcvl:VitalSignsAnthropometry

LinkML Source

Direct

name: VitalSignsAnthropometry
description: 'BDC Variable Library category: Vital Signs/Anthropometry'
from_schema: https://w3id.org/bdc/varlib
slots:
- bdy_hgt
- bdy_temp
- bdy_wgt
- blood_pressure
- bmi
- body_measures
- hip_circ
- hrt_rt
- hrtrt
- mean_art_press
- mn_art_pres
- spo2
- waist_circ
- waist_hip

Induced

name: VitalSignsAnthropometry
description: 'BDC Variable Library category: Vital Signs/Anthropometry'
from_schema: https://w3id.org/bdc/varlib
attributes:
  bdy_hgt:
    name: bdy_hgt
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, MESA, SPIROMICS, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht012835, pht004102, pht004032, pht006467, pht006468, pht004035, pht004034,
          pht006469, pht006419, pht012855, pht001781, pht001626, pht001667, pht001795,
          pht001857, pht001671, pht001632, pht001706, pht001720, pht001755, pht001785,
          pht001583, pht001756, pht001450, pht001452, pht001490, pht001491, pht001495,
          pht003700, pht002239, pht000009, pht000012, pht000013, pht000014, pht000015,
          pht000016, pht000017, pht000018, pht000019, pht000020, pht000021, pht000022,
          pht000023, pht000024, pht000025, pht000026, pht000027, pht000028, pht000029,
          pht000030, pht000031, pht000032, pht000033, pht000034, pht000035, pht000036,
          pht000074, pht000395, pht000397, pht000692, pht000747, pht003094, pht004814,
          pht004815, pht005140, pht005141, pht005142, pht006005, pht006007, pht006026,
          pht007777, pht009761, pht004715, pht008737, pht008731, pht008738, pht008730,
          pht008729, pht001940, pht001111, pht001112, pht001114, pht001116, pht001118,
          pht001119, pht001120, pht001121, pht001122, pht003086, pht003087, pht003091,
          pht013308, pht006217, pht006223, pht001019
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/bdy_hgt.yaml, CARDIA-ingest/bdy_hgt.yaml, CHS-ingest/bdy_hgt.yaml,
          COPDGene-ingest/bdy_hgt.yaml, FHS-ingest/bdy_hgt.yaml, HCHS-ingest/bdy_hgt.yaml,
          JHS-ingest/bdy_hgt.yaml, MESA-ingest/bdy_hgt.yaml, SPIROMICS-ingest/bdy_hgt.yaml,
          WHI-ingest/bdy_hgt.yaml
    description: MeasurementObservation derivation of 'bdy_hgt'
    title: bdy_hgt
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:VT0001253
    - OMOP:607590
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  bdy_temp:
    name: bdy_temp
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: MESA
      dataset_accession:
        tag: dataset_accession
        value: pht001114
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: MESA-ingest/bdy_temp.yaml
    description: MeasurementObservation derivation of 'bdy_temp'
    title: bdy_temp
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:VT0005535
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  bdy_wgt:
    name: bdy_wgt
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, MESA, SPIROMICS, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004032, pht004033, pht004034, pht004035, pht006467, pht006468, pht001671,
          pht001790, pht001749, pht001725, pht001785, pht001857, pht001720, pht001795,
          pht001632, pht001583, pht001706, pht001450, pht001452, pht001475, pht001490,
          pht001491, pht001495, pht001474, pht002239, pht000031, pht006026, pht007777,
          pht009761, pht004715, pht008729, pht008731, pht008730, pht001940, pht001111,
          pht001116, pht001121, pht003086, pht003091, pht013308, pht000995, pht001014,
          pht000991, pht000992, pht000994, pht000993, pht006215, pht001019
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/bdy_wgt.yaml, CARDIA-ingest/bdy_wgt.yaml, CHS-ingest/bdy_wgt.yaml,
          COPDGene-ingest/bdy_wgt.yaml, FHS-ingest/bdy_wgt.yaml, HCHS-ingest/bdy_wgt.yaml,
          JHS-ingest/bdy_wgt.yaml, MESA-ingest/bdy_wgt.yaml, SPIROMICS-ingest/bdy_wgt.yaml,
          WHI-ingest/bdy_wgt.yaml
    description: MeasurementObservation derivation of 'bdy_wgt'
    title: bdy_wgt
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:VT0001259
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  blood_pressure:
    name: blood_pressure
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservationSet, MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, MESA, SPIROMICS, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004192, pht004193, pht004194, pht004195, pht006480, pht004027, pht004028,
          pht004029, pht006414, pht004041, pht004042, pht004043, pht006415, pht004229,
          pht004230, pht004079, pht001560, pht001650, pht001450, pht001452, pht001488,
          pht001489, pht001490, pht001491, pht001492, pht001493, pht001474, pht001475,
          pht001495, pht003699, pht003700, pht002239, pht000035, pht000036, pht000074,
          pht000692, pht000747, pht003094, pht004814, pht004815, pht005140, pht005141,
          pht005142, pht006005, pht006006, pht006007, pht006008, pht010724, pht015104,
          pht007777, pht009761, pht006026, pht004715, pht008783, pht008731, pht001974,
          pht008782, pht008729, pht008730, pht001111, pht001116, pht001118, pht001119,
          pht001120, pht001121, pht003086, pht003087, pht003091, pht013308, pht006223,
          pht001019, pht006217
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/blood_pressure.yaml, CARDIA-ingest/blood_pressure.yaml,
          CHS-ingest/blood_pressure.yaml, COPDGene-ingest/blood_pressure.yaml, FHS-ingest/blood_pressure.yaml,
          HCHS-ingest/blood_pressure.yaml, JHS-ingest/blood_pressure.yaml, MESA-ingest/blood_pressure.yaml,
          SPIROMICS-ingest/blood_pressure.yaml, WHI-ingest/blood_pressure.yaml
    description: MeasurementObservationSet/MeasurementObservation derivation of 'blood_pressure'
    title: blood_pressure
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:4152194
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  bmi:
    name: bmi
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, LTRC, MESA, SPIROMICS,
          WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004063, pht012502, pht012811, pht001583, pht001671, pht001720, pht001785,
          pht001857, pht003298, pht001632, pht001450, pht001452, pht001490, pht001491,
          pht001495, pht003700, pht002239, pht006026, pht007777, pht009761, pht000395,
          pht000397, pht004715, pht008729, pht008730, pht008731, pht010057, pht001111,
          pht001116, pht001118, pht001119, pht001120, pht001121, pht003086, pht003091,
          pht013308, pht001019, pht006217
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/bmi.yaml, CARDIA-ingest/bmi.yaml, CHS-ingest/bmi.yaml,
          COPDGene-ingest/bmi.yaml, FHS-ingest/bmi.yaml, HCHS-ingest/bmi.yaml, JHS-ingest/bmi.yaml,
          LTRC-ingest/bmi.yaml, MESA-ingest/bmi.yaml, SPIROMICS-ingest/bmi.yaml, WHI-ingest/bmi.yaml
    description: MeasurementObservation derivation of 'bmi'
    title: bmi
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:2045455
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  body_measures:
    name: body_measures
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: LTRC
      dataset_accession:
        tag: dataset_accession
        value: pht010057
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: LTRC-ingest/body_measures.yaml
    description: MeasurementObservation derivation of 'body_measures'
    title: body_measures
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:VT0001253
    - OBA:VT0001259
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  hip_circ:
    name: hip_circ
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, FHS, HCHS, JHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004033, pht004034, pht006419, pht004035, pht004032, pht001671, pht001720,
          pht001785, pht001583, pht001450, pht001452, pht001490, pht001491, pht000021,
          pht000022, pht000023, pht000024, pht000025, pht000033, pht000034, pht000035,
          pht000036, pht003094, pht004814, pht005140, pht006026, pht007777, pht009761,
          pht004715, pht008737, pht008730, pht008738, pht008731, pht001111, pht001116,
          pht001118, pht001119, pht001120, pht003086, pht003091, pht001019
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/hip_circ.yaml, CARDIA-ingest/hip_circ.yaml, CHS-ingest/hip_circ.yaml,
          FHS-ingest/hip_circ.yaml, HCHS-ingest/hip_circ.yaml, JHS-ingest/hip_circ.yaml,
          MESA-ingest/hip_circ.yaml, WHI-ingest/hip_circ.yaml
    description: MeasurementObservation derivation of 'hip_circ'
    title: hip_circ
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:1000032
    - OMOP:4111665
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  hrt_rt:
    name: hrt_rt
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: COPDGene, SPIROMICS
      dataset_accession:
        tag: dataset_accession
        value: pht002239, pht013308
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: COPDGene-ingest/hrt_rt.yaml, SPIROMICS-ingest/hrt_rt.yaml
    description: MeasurementObservation derivation of 'hrt_rt'
    title: hrt_rt
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:1001087
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  hrtrt:
    name: hrtrt
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, FHS, HCHS, JHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004194, pht004195, pht004084, pht012824, pht012822, pht004088, pht004232,
          pht006415, pht004085, pht004079, pht004087, pht004073, pht004076, pht004044,
          pht004083, pht004071, pht004074, pht004077, pht012819, pht004102, pht004078,
          pht004072, pht004045, pht012820, pht004234, pht006414, pht004075, pht012823,
          pht004086, pht004233, pht006436, pht004089, pht004080, pht012821, pht004231,
          pht001593, pht001747, pht001860, pht001684, pht001450, pht001451, pht001452,
          pht001474, pht001475, pht001488, pht001489, pht001490, pht001491, pht001492,
          pht001493, pht001494, pht001495, pht003700, pht000028, pht000029, pht000031,
          pht000194, pht000195, pht000196, pht000197, pht000209, pht000210, pht000211,
          pht000394, pht000673, pht000692, pht000748, pht000830, pht002572, pht002573,
          pht005141, pht006018, pht004715, pht008731, pht008782, pht001955, pht008729,
          pht001974, pht008783, pht001111, pht001116, pht001118, pht001119, pht001120,
          pht002195, pht003086, pht003091, pht006223, pht002118
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/hrtrt.yaml, CARDIA-ingest/hrtrt.yaml, CHS-ingest/hrtrt.yaml,
          FHS-ingest/hrtrt.yaml, HCHS-ingest/hrtrt.yaml, JHS-ingest/hrtrt.yaml, MESA-ingest/hrtrt.yaml,
          WHI-ingest/hrtrt.yaml
    description: MeasurementObservation derivation of 'hrtrt'
    title: hrtrt
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:1001087
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  mean_art_press:
    name: mean_art_press
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: FHS
      dataset_accession:
        tag: dataset_accession
        value: pht000195, pht000194, pht000211, pht000209, pht000210
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: FHS-ingest/mean_art_press.yaml
    description: MeasurementObservation derivation of 'mean_art_press'
    title: mean_art_press
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:VT2000000
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  mn_art_pres:
    name: mn_art_pres
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, MESA
      dataset_accession:
        tag: dataset_accession
        value: pht004102, pht001684, pht001633, pht001116
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/mn_art_pres.yaml, CARDIA-ingest/mn_art_pres.yaml, MESA-ingest/mn_art_pres.yaml
    description: MeasurementObservation derivation of 'mn_art_pres'
    title: mn_art_pres
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:VT2000000
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  spo2:
    name: spo2
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: CHS, COPDGene, FHS, HCHS
      dataset_accession:
        tag: dataset_accession
        value: pht001495, pht002239, pht006018, pht004715
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: CHS-ingest/spo2.yaml, COPDGene-ingest/spo2.yaml, FHS-ingest/spo2.yaml,
          HCHS-ingest/spo2.yaml
    description: MeasurementObservation derivation of 'spo2'
    title: spo2
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:2045443
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  waist_circ:
    name: waist_circ
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, CHS, COPDGene, FHS, HCHS, JHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht004034, pht004033, pht004035, pht004032, pht006419, pht001785, pht001583,
          pht001671, pht001720, pht001857, pht001450, pht001452, pht001475, pht001490,
          pht001491, pht001495, pht002239, pht000139, pht000140, pht003094, pht006005,
          pht004814, pht004815, pht005140, pht000021, pht000022, pht000023, pht000024,
          pht000025, pht000033, pht000034, pht000035, pht000036, pht000747, pht000074,
          pht006026, pht009761, pht007777, pht004715, pht008737, pht008729, pht008731,
          pht008730, pht008738, pht001111, pht001116, pht001118, pht001119, pht001120,
          pht003086, pht003091, pht006217, pht001019
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/waist_circ.yaml, CARDIA-ingest/waist_circ.yaml, CHS-ingest/waist_circ.yaml,
          COPDGene-ingest/waist_circ.yaml, FHS-ingest/waist_circ.yaml, HCHS-ingest/waist_circ.yaml,
          JHS-ingest/waist_circ.yaml, MESA-ingest/waist_circ.yaml, WHI-ingest/waist_circ.yaml
    description: MeasurementObservation derivation of 'waist_circ'
    title: waist_circ
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OBA:1001085
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string
  waist_hip:
    name: waist_hip
    annotations:
      bdchm_class:
        tag: bdchm_class
        value: MeasurementObservation
      source_study:
        tag: source_study
        value: ARIC, CARDIA, HCHS, JHS, MESA, WHI
      dataset_accession:
        tag: dataset_accession
        value: pht012504, pht012814, pht012815, pht012813, pht004063, pht004064, pht003298,
          pht004715, pht008730, pht008731, pht008737, pht008738, pht001111, pht001116,
          pht001118, pht001119, pht001120, pht001121, pht003086, pht003091, pht001019
      variable_accession:
        tag: variable_accession
        value: (derived via expr; see source_file)
      source_file:
        tag: source_file
        value: ARIC-ingest/waist_hip.yaml, CARDIA-ingest/waist_hip.yaml, HCHS-ingest/waist_hip.yaml,
          JHS-ingest/waist_hip.yaml, MESA-ingest/waist_hip.yaml, WHI-ingest/waist_hip.yaml
    description: MeasurementObservation derivation of 'waist_hip'
    title: waist_hip
    from_schema: https://w3id.org/bdc/varlib
    exact_mappings:
    - OMOP:4087501
    rank: 1000
    owner: VitalSignsAnthropometry
    domain_of:
    - VitalSignsAnthropometry
    range: string